Sorry, this is just a short and quick update on monkeypox. You may have seen most of it, just to bring everybody at the same level. I have to prepare for the “sweet duty” of spending the weekend with our grandsons and friends at the beach in Westende. A short break, I promise to be back with more COVID on Tuesday or Wednesday at the latest….
Ep 267-1: Estimated incubation time Eurosurveillance
Mean incubation period was 8.5 days (5th–95th percentiles: 4.2–17.3), underpinning the
current recommendation to monitor or isolate/quarantine case contacts for 21 days.
Ep 267-2: Tracking the 2022 monkeypox outbreak with epidemiological data in real-time
Ep 267-3: Investigation into monkeypox outbreak in England: technical briefing 1 - GOV.UK
Clear evidence for transmission related to sexual practice in “diffuse sexual networks”:
- Nearly all (98%) of interviewed cases reported sex with other men during the incubation period (5 to 21 days).
- The majority (60%, 27 out of 45) were diagnosed with an STI int he previous year,
- 44% (20 out of 45) reported more than 10 sexual partners in the previous 3 months, and 44% (20 out of 45) reported group sex during the incubation period.
- Sexual networks involved in this outbreak are interconnected both within and outside the UK, as 30% (13 out of 45) of cases reported sexual activity in cities other than their place of residence, 20% (9 out of 45) reported sexual activity abroad, and 24% (11 out of 45) reported sexual activity with men who are not UK residents during the incubation period.
Mutations: 21 (out of 48) that cause differences in proteins. Of these
2 mutations of low priority:
- C9L(R48C): Interferon agonist, when deleted the virus replicates worse in the presence of interferon
- (H221Y): Virulence factor, deletion of gene reduces virus virulence in mice.
4 mutations at medium priority:
- C23L(S105L): Chemokine binding protein, deletion of this gene from the virus increases disease severity in rabbits
- C22L(S54F): Tumour necrosis factor (TNF) receptor-like protein – deletion may increase lung pathology in mice
- C19L(D266N): Ankyrin repeat protein (unknown function-might be host range or virulence)
- F13L(E353K): Target of antiviral drug tecovirimat. Tecovirimat resistance has been shown to be conferred by a single mutation atF13L(G277C)
3 mutations in one protein which are classed as high priority:
B21/B22(D209N, P722S, M1741I): T-cell inhibitor also found in cowpox, camelpox and horsepox, knock-in of this protein into non-virulent cowpox strains increased disease severity and mortality in rats.
The mean serial interval time was estimated at 9.8 days (95%CI 5.9 to 21.4),
Ep 267-4: Renaming Monkeypox to avoid stigmatization
Human monkeypox (hMPXV) as a placeholder name with numbers representing clades: 1 for Congo Basin as it was the first to be detected, 2 for West African, and 3 for the current “European” strain.
5 Oct 2022 Episode 289: Omicron BA.2.75 revisited and the outlook for new variants, including BQ.1.1
> More info